Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs6053913 chr20:6095127 A/C 0.000124 287 25.67 26.4 9 KM Plot
KIRP rs60576917 chr11:65612393 C/T 0 275 25.6 30.1 8.7 KM Plot
KIRP rs60676610 chr1:26543421 G/C 8.17E-5 281 25.82 28.87 13.17 KM Plot
KIRP rs61095097 chr21:33869865 C/T 3.02E-14 277 26.1 26.02 3.73 KM Plot
KIRP rs61142746 chr11:47008125 C/T 7.54E-12 288 25.57 28.03 10.82 KM Plot
KIRP rs61156968 chr4:5538859 G/A 4.69E-5 283 25.7 26.37 12.93 KM Plot
KIRP rs61199970 chr6:148665208 T/G 9.7E-5 286 26.4 18.67 18.2 KM Plot
KIRP rs61262489 chr1:197928019 A/G 0.000142 287 24.67 31.12 21.85 KM Plot
KIRP rs61282612 chr11:47026699 AAG/A 2.38E-6 288 25.02 28.17 12.63 KM Plot
KIRP rs61340969 chr4:16368726 G/A 0.000109 287 25.67 26.4 14.18 KM Plot
KIRP rs6142926 chr20:60604418 C/T 0.000137 285 26.2 25.57 10.23 KM Plot
KIRP rs6142932 chr20:60611183 G/A 0.00011 288 25.65 29.77 10.23 KM Plot
KIRP rs61480451 chr10:74909188 A/G 9.77E-15 288 26.37 21.97 5.6 KM Plot
KIRP rs61602390 chr14:69420464 C/T 4.4E-5 276 26.2 26.4 6.1 KM Plot
KIRP rs61608823 chr1:26555090 G/A 6.61E-5 286 25.93 27.75 13.17 KM Plot